Sequence Similarity Clusters for the Entities in PDB 1NMY

Entity #1 | Chains: A
similar to THYMIDYLATE KINASE (DTMP KINASE) protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 3158
95 % 3 21 3098 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 21 3150
70 % 3 21 3075
50 % 3 21 3025
40 % 3 23 2480
30 % 13 140 212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures