Sequence Similarity Clusters for the Entities in PDB 1NMU

Entity #1 | Chains: A,C
maltose-binding periplasmic protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 57 384
95 % 72 106 229 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.0
PDBFlex
90 % 79 126 156
70 % 107 173 97
50 % 107 173 134
40 % 107 173 149
30 % 122 190 152
Entity #2 | Chains: B,D
60S ribosomal protein L30 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 63 276
95 % 1 63 386 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.1
PDBFlex
90 % 1 64 409
70 % 1 64 450
50 % 2 110 334
40 % 2 110 352
30 % 14 126 311

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.