Sequence Similarity Clusters for the Entities in PDB 1NMU

Entity #1 | Chains: A,C
maltose-binding periplasmic protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 57 364
95 % 72 105 225 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.2
PDBFlex
90 % 79 125 154
70 % 102 167 96
50 % 102 167 134
40 % 102 167 148
30 % 117 184 151
Entity #2 | Chains: B,D
60S ribosomal protein L30 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 61 272
95 % 1 61 385 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.1
PDBFlex
90 % 1 62 408
70 % 1 62 451
50 % 2 106 323
40 % 2 106 352
30 % 14 122 314

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.