Sequence Similarity Clusters for the Entities in PDB 1NMQ

Entity #1 | Chains: A,B
Caspase-3 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2843
95 % 55 58 534 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 55 58 563
70 % 55 58 605
50 % 62 78 446
40 % 82 108 264
30 % 83 113 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2J32 1 A CASPASE-3 RESIDUES 29-277 9606 3.4.22.56 | Details
2 5IBP 1 A Caspase-3 9606 3.4.22.56 | Details
3 4JJE 1 A Caspase-3 9606 3.4.22.56 | Details
4 2J30 1 A CASPASE-3 RESIDUES 29-277 9606 3.4.22.56 | Details
5 4QUJ 1 A Caspase-3 9606 3.4.22.56 | Details
6 4QU9 1 A Caspase-3 9606 3.4.22.56 | Details
7 5IAE 1 A, C Caspase-3 9606 3.4.22.56 | Details
8 5IAS 1 A Caspase-3 9606 3.4.22.56 | Details
9 3PCX 1 A Caspase-3 UNP residues 29-277 9606 3.4.22.56 | Details
10 2J31 1 A CASPASE-3 RESIDUES 29-277 9606 3.4.22.56 | Details
11 4PS0 1 A, B Caspase-3 9606 3.4.22.56 | Details
12 4QTY 1 A Caspase-3 9606 3.4.22.56 | Details
13 5IAJ 1 A Caspase-3 9606 3.4.22.56 | Details
14 4EHD 1 A Caspase-3 9606 3.4.22.56 | Details
15 4EHF 1 A Caspase-3 9606 3.4.22.56 | Details
16 1NMS 1 A, B Caspase-3 large subunit 9606 3.4.22.56 | Details
17 4QUB 1 A Caspase-3 9606 3.4.22.56 | Details
18 4PRY 1 A Caspase-3 9606 3.4.22.56 | Details
19 4EHN 1 A Caspase-3 9606 3.4.22.56 | Details
20 5IBC 1 A Caspase-3 9606 3.4.22.56 | Details
21 4QU8 1 A Caspase-3 9606 3.4.22.56 | Details
22 4QUI 1 A, B Caspase-3 9606 3.4.22.56 | Details
23 3ITN 1 A Caspase-3 9606 3.4.22.56 | Details
24 4QUH 1 A, C Caspase-3 9606 3.4.22.56 | Details
25 3PD1 1 A Caspase-3 UNP residues 29-277 9606 3.4.22.56 | Details
26 5IAR 1 A Caspase-3 9606 3.4.22.56 | Details
27 4EHK 1 A, C Caspase-3 9606 3.4.22.56 | Details
28 4EHL 1 A, C Caspase-3 9606 3.4.22.56 | Details
29 5IBR 1 A, C Caspase-3 9606 3.4.22.56 | Details
30 4JR0 1 A, B Procaspase-3 protease domain (UNP residues 34-277) 9606 3.4.22.56 | Details
31 4EHA 1 A, C Caspase-3 Caspase-2 9606 3.4.22.56 | Details
32 5IAK 1 A Caspase-3 9606 3.4.22.56 | Details
33 5I9B 1 A Caspase-3 9606 3.4.22.56 | Details
34 5IAB 1 A, C Caspase-3 9606 3.4.22.56 | Details
35 4QUG 1 A, C Caspase-3 9606 3.4.22.56 | Details
36 4QU0 1 A Caspase-3 9606 3.4.22.56 | Details
37 4QUE 1 A, C Caspase-3 9606 3.4.22.56 | Details
38 5I9T 1 A, C Caspase-3 9606 3.4.22.56 | Details
39 5IAG 1 A Caspase-3 9606 3.4.22.56 | Details
40 2J33 1 A CASPASE-3 RESIDUES 29-277 9606 3.4.22.56 | Details
41 3PD0 1 A Caspase-3 UNP residues 29-277 9606 3.4.22.56 | Details
42 4QU5 1 A Caspase-3 9606 3.4.22.56 | Details
43 3H0E 1 A, B Caspase-3 Subunits p17 and p12 9606 3.4.22.56 | Details
44 4EHH 1 A Caspase-3 9606 3.4.22.56 | Details
45 4QUA 1 A Caspase-3 9606 3.4.22.56 | Details
46 4QUL 1 A, C Caspase-3 9606 3.4.22.56 | Details
47 4QTX 1 A Caspase-3 9606 3.4.22.56 | Details
48 1QX3 1 A Apopain 9606 3.4.22.56 | Details
49 4QUD 1 A, B Caspase-3 9606 3.4.22.56 | Details
50 1CP3 1 A, B APOPAIN 9606 3.4.22.56 | Details
51 3DEK 1 A, B, C, D Caspase-3 9606 3.4.22.56 | Details
52 5IAN 1 A Caspase-3 9606 3.4.22.56 | Details
53 4JQY 1 A, B Procaspase-3 protease domain (UNP residues 34-277) 9606 3.4.22.56 | Details
54 3DEH 1 A, B, C, D Caspase-3 9606 3.4.22.56 | Details
55 1NMQ 1 A, B Caspase-3 large subunit 9606 3.4.22.56 | Details
56 3DEJ 1 A, B, C, D Caspase-3 9606 3.4.22.56 | Details
57 3DEI 1 A, B, C, D Caspase-3 9606 3.4.22.56 | Details
58 4JQZ 1 A, B Procaspase-3 protease domain (UNP residues 34-277) 9606 3.4.22.56 | Details