Sequence Similarity Clusters for the Entities in PDB 1NMQ

Entity #1 | Chains: A,B
Caspase-3 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2257
95 % 55 58 430 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 55 58 465
70 % 55 58 505
50 % 61 77 400
40 % 77 100 241
30 % 82 112 218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.