Sequence Similarity Clusters for the Entities in PDB 1NMQ

Entity #1 | Chains: A,B
Caspase-3 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2306
95 % 55 58 440 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.6
PDBFlex
90 % 55 58 475
70 % 55 58 519
50 % 61 77 406
40 % 77 100 247
30 % 82 112 219

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.