Sequence Similarity Clusters for the Entities in PDB 1NMP

Entity #1 | Chains: A,B,C,D,E,F
Hypothetical protein ybgI protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6101
95 % 2 2 6272 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 6262
70 % 2 2 6107
50 % 2 2 5710
40 % 2 2 5332
30 % 2 3 3944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures