Sequence Similarity Clusters for the Entities in PDB 1NMO

Entity #1 | Chains: A,B,C,D,E,F
Hypothetical protein ybgI protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 4970
95 % 1 2 5688 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 5699
70 % 1 2 5593
50 % 1 2 5277
40 % 1 2 4961
30 % 1 3 3905

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.