Sequence Similarity Clusters for the Entities in PDB 1NMN

Entity #1 | Chains: A,B
Hypothetical protein yqgF protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16533
95 % 2 3 15354 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.6
PDBFlex
90 % 2 3 15036
70 % 2 3 14069
50 % 2 3 12430
40 % 2 3 11155
30 % 3 4 7342

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures