Sequence Similarity Clusters for the Entities in PDB 1NMK

Entity #1 | Chains: A,B
Peptidyl-prolyl cis-trans isomerase A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 79 112 112
95 % 89 126 142 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 89 127 151
70 % 140 184 125
50 % 167 223 108
40 % 174 241 125
30 % 180 251 130

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.