Sequence Similarity Clusters for the Entities in PDB 1NME

Entity #1 | Chains: A
Caspase-3 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 37 712
95 % 3 40 875
90 % 3 40 908
70 % 3 40 932
50 % 3 41 942
40 % 4 48 710
30 % 4 48 701
Entity #2 | Chains: B
Caspase-3 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44930
95 % 3 39 879
90 % 3 42 801
70 % 3 42 841
50 % 3 66 420
40 % 3 67 446
30 % 4 83 308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.