Sequence Similarity Clusters for the Entities in PDB 1NME

Entity #1 | Chains: A
Caspase-3 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 37 739
95 % 3 40 904
90 % 3 40 937
70 % 3 40 963
50 % 3 41 977
40 % 4 48 753
30 % 4 48 744
Entity #2 | Chains: B
Caspase-3 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46579
95 % 3 39 906
90 % 3 42 831
70 % 3 42 865
50 % 3 66 441
40 % 3 67 465
30 % 4 83 323

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.