Sequence Similarity Clusters for the Entities in PDB 1NMD

Entity #1 | Chains: A
Actin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23622
95 % 40 173 13
90 % 41 178 14
70 % 42 181 23
50 % 42 183 33
40 % 42 202 32
30 % 42 222 50
Entity #2 | Chains: G
Gelsolin protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 3330
95 % 8 25 1974
90 % 8 25 2022
70 % 8 25 2029
50 % 8 25 2026
40 % 8 25 2031
30 % 8 25 1947

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.