Sequence Similarity Clusters for the Entities in PDB 1NMC

Entity #1 | Chains: A,N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1641
95 % 40 44 1018
90 % 51 55 843
70 % 59 63 499
50 % 125 143 174
40 % 125 143 189
30 % 145 166 144
Entity #2 | Chains: B,H
SINGLE CHAIN ANTIBODY protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27579
95 % 3 4 14036
90 % 3 4 13786
70 % 42 82 232
50 % 323 509 8
40 % 544 848 5
30 % 612 974 7
Entity #3 | Chains: C,L
SINGLE CHAIN ANTIBODY protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27826
95 % 3 4 14101
90 % 6 8 6106
70 % 122 183 74
50 % 189 294 22
40 % 545 848 5
30 % 613 974 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.