Sequence Similarity Clusters for the Entities in PDB 1NMC

Entity #1 | Chains: A,N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1575
95 % 40 44 969
90 % 51 55 783
70 % 59 63 457
50 % 125 143 168
40 % 125 143 180
30 % 145 166 142
Entity #2 | Chains: B,H
SINGLE CHAIN ANTIBODY protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26672
95 % 3 4 13583
90 % 3 4 13338
70 % 40 78 233
50 % 313 486 8
40 % 532 819 5
30 % 600 945 8
Entity #3 | Chains: C,L
SINGLE CHAIN ANTIBODY protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26910
95 % 3 4 13644
90 % 6 8 5884
70 % 121 179 70
50 % 187 288 21
40 % 533 819 5
30 % 601 945 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.