Sequence Similarity Clusters for the Entities in PDB 1NMC

Entity #1 | Chains: A,N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1727
95 % 40 44 1052
90 % 55 59 803
70 % 63 67 498
50 % 129 147 178
40 % 129 147 194
30 % 149 170 145
Entity #2 | Chains: B,H
SINGLE CHAIN ANTIBODY protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 28701
95 % 3 4 14618
90 % 3 4 14346
70 % 42 82 258
50 % 347 547 8
40 % 572 895 5
30 % 640 1021 7
Entity #3 | Chains: C,L
SINGLE CHAIN ANTIBODY protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 28950
95 % 3 4 14687
90 % 6 8 6377
70 % 122 188 71
50 % 193 303 21
40 % 573 895 5
30 % 641 1021 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.