Sequence Similarity Clusters for the Entities in PDB 1NMC

Entity #1 | Chains: A,N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1631
95 % 40 44 1011
90 % 51 55 838
70 % 59 63 492
50 % 125 143 173
40 % 125 143 187
30 % 145 166 143
Entity #2 | Chains: B,H
SINGLE CHAIN ANTIBODY protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27395
95 % 3 4 13932
90 % 3 4 13680
70 % 42 82 229
50 % 320 504 8
40 % 541 844 5
30 % 609 970 7
Entity #3 | Chains: C,L
SINGLE CHAIN ANTIBODY protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27641
95 % 3 4 13996
90 % 6 8 6055
70 % 122 184 72
50 % 189 295 21
40 % 542 844 5
30 % 610 970 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.