Sequence Similarity Clusters for the Entities in PDB 1NMA

Entity #1 | Chains: N
N9 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52780
95 % 43 44 1053
90 % 58 59 803
70 % 66 67 499
50 % 143 147 178
40 % 143 147 195
30 % 165 170 145
Entity #2 | Chains: L
FAB NC10 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45920
95 % 4 4 14712
90 % 7 8 6383
70 % 137 188 72
50 % 219 303 21
40 % 675 897 5
30 % 751 1023 7
Entity #3 | Chains: H
FAB NC10 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66577
95 % 4 4 14643
90 % 4 4 14373
70 % 53 82 258
50 % 416 549 8
40 % 676 897 5
30 % 752 1023 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.