Sequence Similarity Clusters for the Entities in PDB 1NM6

Entity #1 | Chains: A
thrombin protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 21 2202
95 % 159 377 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 159 384 39
70 % 159 408 46
50 % 159 408 84
40 % 919 1719 4
30 % 977 1869 6
Entity #2 | Chains: B
Hirudin protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures