Sequence Similarity Clusters for the Entities in PDB 1NM5

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit alpha part 1 protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32690
95 % 8 15 1273 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 8 15 1298
70 % 8 15 1318
50 % 8 16 1294
40 % 16 26 901
30 % 26 38 532
Entity #2 | Chains: C
NAD(P) transhydrogenase subunit beta protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 8836
95 % 4 9 7501
90 % 4 9 7459
70 % 4 9 7234
50 % 4 9 6681
40 % 7 12 3883
30 % 7 12 3578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.