Sequence Similarity Clusters for the Entities in PDB 1NM5

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit alpha part 1 protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33162
95 % 8 15 1291 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 8 15 1317
70 % 8 15 1333
50 % 8 16 1312
40 % 16 26 913
30 % 26 38 542
Entity #2 | Chains: C
NAD(P) transhydrogenase subunit beta protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 8987
95 % 4 9 7650
90 % 4 9 7605
70 % 4 9 7351
50 % 4 9 6777
40 % 7 12 3943
30 % 7 12 3635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.