Sequence Similarity Clusters for the Entities in PDB 1NM1

Entity #1 | Chains: A
Actin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25688
95 % 30 179 15 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 30 184 15
70 % 32 189 23
50 % 32 192 36
40 % 32 211 41
30 % 32 231 53
Entity #2 | Chains: G
Gelsolin protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 3651
95 % 5 26 2091 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 26 2143
70 % 5 26 2135
50 % 5 26 2122
40 % 5 26 2113
30 % 5 26 2029

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.