Sequence Similarity Clusters for the Entities in PDB 1NLY

Entity #1 | Chains: A,B
virB11 homolog protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 2742
95 % 3 5 3445 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 3 5 3489
70 % 3 5 3457
50 % 3 5 3378
40 % 3 5 3272
30 % 3 5 3066

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.