Sequence Similarity Clusters for the Entities in PDB 1NLY

Entity #1 | Chains: A,B
virB11 homolog protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 2804
95 % 3 5 3499 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 3 5 3549
70 % 3 5 3504
50 % 3 5 3414
40 % 3 5 3305
30 % 3 5 3098

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures