Sequence Similarity Clusters for the Entities in PDB 1NLV

Entity #1 | Chains: A
Actin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25994
95 % 35 181 14 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 35 186 14
70 % 37 191 20
50 % 37 194 27
40 % 37 213 36
30 % 37 233 51
Entity #2 | Chains: G
Gelsolin protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 15 3074
95 % 6 28 1924
90 % 6 28 1968
70 % 6 28 1995
50 % 6 28 2005
40 % 6 28 1998
30 % 6 28 1920

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures