Sequence Similarity Clusters for the Entities in PDB 1NLV

Entity #1 | Chains: A
Actin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 9799
95 % 35 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 35 211 9
70 % 37 216 11
50 % 37 223 15
40 % 37 242 25
30 % 37 262 39
Entity #2 | Chains: G
Gelsolin protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 18 2881
95 % 6 29 1898 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 6 29 1937
70 % 6 29 1956
50 % 6 29 1981
40 % 6 29 1962
30 % 6 29 1867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures