Sequence Similarity Clusters for the Entities in PDB 1NLV

Entity #1 | Chains: A
Actin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26844
95 % 35 197 9 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 35 203 10
70 % 37 208 13
50 % 37 215 15
40 % 37 234 24
30 % 37 254 42
Entity #2 | Chains: G
Gelsolin protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 16 3036
95 % 6 29 1903
90 % 6 29 1947
70 % 6 29 1963
50 % 6 29 1981
40 % 6 29 1977
30 % 6 29 1907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures