Sequence Similarity Clusters for the Entities in PDB 1NLQ

Entity #1 | Chains: A,B,C,D,E
Nucleoplasmin-like protein protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16002
95 % 1 1 15004 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 1 14728
70 % 1 1 13803
50 % 1 1 12251
40 % 1 1 11107
30 % 1 5 1043

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures