Sequence Similarity Clusters for the Entities in PDB 1NLQ

Entity #1 | Chains: A,B,C,D,E
Nucleoplasmin-like protein protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16567
95 % 1 1 15461 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 1 15174
70 % 1 1 14204
50 % 1 1 12591
40 % 1 1 11405
30 % 1 5 1071

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures