Sequence Similarity Clusters for the Entities in PDB 1NLM

Entity #1 | Chains: A,B
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18529
95 % 2 2 16654 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.4
PDBFlex
90 % 2 2 16328
70 % 2 2 15241
50 % 2 2 13389
40 % 3 3 10462
30 % 3 3 9122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures