Sequence Similarity Clusters for the Entities in PDB 1NLM

Entity #1 | Chains: A,B
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18867
95 % 2 2 16912 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.4
PDBFlex
90 % 2 2 16581
70 % 2 2 15460
50 % 2 2 13580
40 % 3 3 10610
30 % 3 3 9250

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures