Sequence Similarity Clusters for the Entities in PDB 1NLM

Entity #1 | Chains: A,B
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17980
95 % 2 2 16168 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.4
PDBFlex
90 % 2 2 15843
70 % 2 2 14776
50 % 2 2 13003
40 % 3 3 10160
30 % 3 3 8851

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.