Sequence Similarity Clusters for the Entities in PDB 1NLK

Entity #1 | Chains: L,R
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12695
95 % 3 3 12127 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 11948
70 % 12 20 501
50 % 56 129 74
40 % 68 158 39
30 % 68 158 57

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures