Sequence Similarity Clusters for the Entities in PDB 1NLI

Entity #1 | Chains: A
Ribosome-inactivating protein alpha-trichosanthin protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58410
95 % 6 11 4106 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 11 4136
70 % 6 12 3529
50 % 46 90 523
40 % 46 90 564
30 % 85 208 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.