Sequence Similarity Clusters for the Entities in PDB 1NLI

Entity #1 | Chains: A
Ribosome-inactivating protein alpha-trichosanthin protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56425
95 % 6 11 3948 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 11 3975
70 % 6 12 3396
50 % 45 89 513
40 % 45 89 553
30 % 84 207 207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.