Sequence Similarity Clusters for the Entities in PDB 1NLD

Entity #1 | Chains: L
FAB1583 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60082
95 % 45 51 687 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.8
PDBFlex
90 % 46 52 691
70 % 1532 2327 1
50 % 3106 4713 1
40 % 3106 4713 1
30 % 3646 5567 1
Entity #2 | Chains: H
FAB1583 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60539
95 % 1 1 42442
90 % 1 1 40399
70 % 1499 2280 2
50 % 3107 4713 1
40 % 3107 4713 1
30 % 3647 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.