Sequence Similarity Clusters for the Entities in PDB 1NLD

Entity #1 | Chains: L
FAB1583 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62155
95 % 45 52 684 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.8
PDBFlex
90 % 46 53 689
70 % 1644 2479 1
50 % 3332 5021 1
40 % 3332 5021 1
30 % 3938 5951 1
Entity #2 | Chains: H
FAB1583 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62637
95 % 1 1 43855
90 % 1 1 41679
70 % 1608 2429 2
50 % 3333 5021 1
40 % 3333 5021 1
30 % 3939 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures