Sequence Similarity Clusters for the Entities in PDB 1NLD

Entity #1 | Chains: L
FAB1583 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61341
95 % 45 52 677 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.8
PDBFlex
90 % 46 53 684
70 % 1609 2426 1
50 % 3261 4913 1
40 % 3261 4913 1
30 % 3812 5780 1
Entity #2 | Chains: H
FAB1583 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61817
95 % 1 1 43296
90 % 1 1 41166
70 % 1573 2376 2
50 % 3262 4913 1
40 % 3262 4913 1
30 % 3813 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures