Sequence Similarity Clusters for the Entities in PDB 1NLD

Entity #1 | Chains: L
FAB1583 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 23279
95 % 43 50 718 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 47 54 671
70 % 1679 2553 1
50 % 3411 5180 1
40 % 3871 5834 1
30 % 4816 7269 1
Entity #2 | Chains: H
FAB1583 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57626
95 % 1 1 47188
90 % 1 1 44835
70 % 1648 2511 2
50 % 3412 5180 1
40 % 3872 5834 1
30 % 4817 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures