Sequence Similarity Clusters for the Entities in PDB 1NLB

Entity #1 | Chains: L
antibody 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3947
95 % 6 62 383 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 1.8
PDBFlex
90 % 6 83 301
70 % 99 2287 1
50 % 208 4633 1
40 % 208 4633 1
30 % 225 5461 1
Entity #2 | Chains: H
antibody 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3955
95 % 1 7 4733 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 2 9 3765
70 % 102 2244 2
50 % 209 4633 1
40 % 209 4633 1
30 % 226 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.