Sequence Similarity Clusters for the Entities in PDB 1NLB

Entity #1 | Chains: L
antibody 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 4028
95 % 6 62 429 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 6 83 311
70 % 104 2362 1
50 % 219 4781 1
40 % 219 4781 1
30 % 236 5635 1
Entity #2 | Chains: H
antibody 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 4036
95 % 1 7 4813 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 2 9 3825
70 % 107 2311 2
50 % 220 4781 1
40 % 220 4781 1
30 % 237 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures