Sequence Similarity Clusters for the Entities in PDB 1NLB

Entity #1 | Chains: L
antibody 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 4679
95 % 4 58 459 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 6 91 269
70 % 113 2519 1
50 % 238 5107 1
40 % 311 5756 1
30 % 384 7175 1
Entity #2 | Chains: H
antibody 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 4723
95 % 1 7 5050 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 3 18 2337
70 % 116 2478 2
50 % 239 5107 1
40 % 312 5756 1
30 % 385 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures