Sequence Similarity Clusters for the Entities in PDB 1NLB

Entity #1 | Chains: L
antibody 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3869
95 % 6 62 379 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 1.7
PDBFlex
90 % 6 83 296
70 % 98 2264 1
50 % 206 4587 1
40 % 206 4587 1
30 % 223 5392 1
Entity #2 | Chains: H
antibody 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3876
95 % 1 7 4645 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 2 9 3717
70 % 101 2222 2
50 % 207 4587 1
40 % 207 4587 1
30 % 224 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.