Sequence Similarity Clusters for the Entities in PDB 1NL4

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10111
95 % 5 10 6739 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 10 6725
70 % 5 10 6579
50 % 5 10 6109
40 % 5 10 5712
30 % 19 25 2213
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 41 925
95 % 48 56 884 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 48 56 918
70 % 48 56 953
50 % 48 56 1000
40 % 48 56 1019
30 % 48 56 992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.