Sequence Similarity Clusters for the Entities in PDB 1NL4

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 9984
95 % 5 10 6651 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 10 6639
70 % 5 10 6466
50 % 5 10 6013
40 % 5 10 5619
30 % 19 25 2193
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 41 917
95 % 48 56 878
90 % 48 56 912
70 % 48 56 944
50 % 48 56 993
40 % 48 56 1014
30 % 48 56 990

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.