Sequence Similarity Clusters for the Entities in PDB 1NL3

Entity #1 | Chains: A,B
PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT protein, length: 922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16706
95 % 2 2 15581 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 15300
70 % 2 2 14358
50 % 2 2 12730
40 % 2 2 11538
30 % 2 2 10036

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures