Sequence Similarity Clusters for the Entities in PDB 1NL3

Entity #1 | Chains: A,B
PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT protein, length: 922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16988
95 % 2 2 15807 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 15515
70 % 2 2 14549
50 % 2 2 12890
40 % 2 2 11676
30 % 2 2 10157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures