Sequence Similarity Clusters for the Entities in PDB 1NL3

Entity #1 | Chains: A,B
PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT protein, length: 922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15649
95 % 2 2 14659 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 14383
70 % 2 2 13500
50 % 2 2 12017
40 % 2 2 10897
30 % 2 2 9459

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.