Sequence Similarity Clusters for the Entities in PDB 1NL1

Entity #1 | Chains: A
Prothrombin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16475
95 % 1 5 15306 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 5 14992
70 % 1 5 14026
50 % 1 5 12395
40 % 1 5 11126
30 % 29 79 772

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures