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Crystal structure of LH2 B800-850 from Rps. acidophila at 2.0 Angstrom resolution
Sequence Clustering and Redundancy Reduction Results
1NKZ
Sequence Clusters for the Sequence Entities in PDB 1NKZ
Entity #1: Chains: A,C,E - Light-harvesting protein B-800/850, alpha chain protein, length: 53 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 2563
95% 1 3 3192
90% 1 3 3234
70% 1 3 3231
50% 1 4 2644
40% 1 4 2609
30% 1 4 2434
Entity #2: Chains: B,D,F - Light-harvesting protein B-800/850, beta chain protein, length: 41 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 2564
95% 1 3 3194
90% 1 3 3236
70% 1 4 2624
50% 1 4 2647
40% 1 4 2612
30% 1 4 2437
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.