Sequence Similarity Clusters for the Entities in PDB 1NKV

Entity #1 | Chains: A,B,C
HYPOTHETICAL PROTEIN yjhP protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27100
95 % 1 1 22658 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.9
PDBFlex
90 % 1 1 22002
70 % 3 3 9748
50 % 3 3 8848
40 % 3 3 8099
30 % 3 3 7146

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.