Sequence Similarity Clusters for the Entities in PDB 1NKS

Entity #1 | Chains: A,B,C,D,E,F
ADENYLATE KINASE protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13647
95 % 1 1 13047 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.6
PDBFlex
90 % 1 1 12829
70 % 1 1 12069
50 % 1 1 10764
40 % 1 4 3918
30 % 1 4 3648

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures