Sequence Similarity Clusters for the Entities in PDB 1NKQ

Entity #1 | Chains: A,B,C,D,E,F
Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12149
95 % 1 1 11749 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 11583
70 % 1 1 10931
50 % 1 1 9810
40 % 1 1 8914
30 % 2 2 6174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.