Sequence Similarity Clusters for the Entities in PDB 1NKO

Entity #1 | Chains: A
Sialic acid binding Ig-like lectin 7 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66685
95 % 1 6 13087 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 1 6 12866
70 % 1 6 12110
50 % 1 8 8268
40 % 1 8 7581
30 % 1 8 6688

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures