Sequence Similarity Clusters for the Entities in PDB 1NKO

Entity #1 | Chains: A
Sialic acid binding Ig-like lectin 7 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55460
95 % 1 6 13583 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 1 6 13350
70 % 1 6 12519
50 % 1 8 8570
40 % 1 8 7796
30 % 1 8 6760

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures