Sequence Similarity Clusters for the Entities in PDB 1NKN

Entity #1 | Chains: A,B,C,D
S2N51-GCN4 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6899
95 % 3 3 7473 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.9
PDBFlex
90 % 3 3 7418
70 % 3 3 7226
50 % 3 3 6661
40 % 3 3 6205
30 % 3 3 5543

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures