Sequence Similarity Clusters for the Entities in PDB 1NKM

Entity #1 | Chains: A,B
Assemblin protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6361
95 % 14 15 1507 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.9
PDBFlex
90 % 14 15 1538
70 % 14 15 1539
50 % 14 15 1589
40 % 14 15 1607
30 % 17 18 1340

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.