Sequence Similarity Clusters for the Entities in PDB 1NKG

Entity #1 | Chains: A
Rhamnogalacturonase B protein, length: 508 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51032
95 % 2 4 13582 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 4 13372
70 % 2 4 12588
50 % 2 4 11228
40 % 2 4 10194
30 % 2 4 8893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.