Sequence Similarity Clusters for the Entities in PDB 1NKG

Entity #1 | Chains: A
Rhamnogalacturonase B protein, length: 508 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53234
95 % 2 4 14226 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 4 13997
70 % 2 4 13143
50 % 2 4 11711
40 % 2 4 10616
30 % 2 4 9264

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures