Sequence Similarity Clusters for the Entities in PDB 1NKG

Entity #1 | Chains: A
Rhamnogalacturonase B protein, length: 508 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51762
95 % 2 4 13775 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 4 13557
70 % 2 4 12750
50 % 2 4 11368
40 % 2 4 10319
30 % 2 4 9008

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures