Sequence Similarity Clusters for the Entities in PDB 1NKG

Entity #1 | Chains: A
Rhamnogalacturonase B protein, length: 508 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52557
95 % 2 4 14006 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 4 13784
70 % 2 4 12959
50 % 2 4 11552
40 % 2 4 10481
30 % 2 4 9147

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures