Sequence Similarity Clusters for the Entities in PDB 1NKG

Entity #1 | Chains: A
Rhamnogalacturonase B protein, length: 508 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 19421
95 % 2 4 15432 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 4 15303
70 % 2 4 14326
50 % 2 4 12649
40 % 2 4 11354
30 % 2 4 9642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures