Sequence Similarity Clusters for the Entities in PDB 1NKD

Entity #1 | Chains: A
ROP protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48486
95 % 1 14 2364 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 1.9
PDBFlex
90 % 1 15 2263
70 % 1 17 1622
50 % 1 17 1655
40 % 1 17 1672
30 % 1 17 1637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.