Sequence Similarity Clusters for the Entities in PDB 1NK8

Entity #1 | Chains: B
DNA PRIMER STRAND dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA TEMPLATE STRAND dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
DNA POLYMERASE I protein, length: 580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 46 736
95 % 51 95 270
90 % 51 95 279
70 % 51 95 318
50 % 51 95 377
40 % 51 95 406
30 % 51 95 408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.