Sequence Similarity Clusters for the Entities in PDB 1NK1

Entity #1 | Chains: A,B
PROTEIN (HEPATOCYTE GROWTH FACTOR PRECURSOR) protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 13 1737
95 % 15 18 1161 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 16 19 1143
70 % 16 19 1179
50 % 16 19 1222
40 % 16 19 1232
30 % 16 19 1211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures