Sequence Similarity Clusters for the Entities in PDB 1NJK

Entity #1 | Chains: A,B,C,D
Hypothetical protein ybaW protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23392
95 % 1 1 20099 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.8
PDBFlex
90 % 1 1 19548
70 % 1 1 18043
50 % 1 1 15650
40 % 1 1 13910
30 % 1 1 11896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures