Sequence Similarity Clusters for the Entities in PDB 1NJA

Entity #1 | Chains: A
THYMIDYLATE SYNTHASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 47 956
95 % 16 51 1050 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 16 51 1079
70 % 18 55 890
50 % 126 214 95
40 % 127 216 116
30 % 130 222 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures