Sequence Similarity Clusters for the Entities in PDB 1NJ9

Entity #1 | Chains: A,L
immunoglobulin variable chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42512
95 % 1 1 32294
90 % 16 45 458
70 % 1030 2474 1
50 % 2107 5011 1
40 % 2107 5011 1
30 % 2410 5941 1
Entity #2 | Chains: B,H
immunoglobulin heavy chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42154
95 % 1 1 32110
90 % 1 1 30780
70 % 1018 2424 2
50 % 2108 5011 1
40 % 2108 5011 1
30 % 2411 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures