Sequence Similarity Clusters for the Entities in PDB 1NJ9

Entity #1 | Chains: A,L
immunoglobulin variable chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41691
95 % 1 1 31719
90 % 16 45 436
70 % 988 2392 1
50 % 2021 4843 1
40 % 2021 4843 1
30 % 2282 5705 1
Entity #2 | Chains: B,H
immunoglobulin heavy chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41339
95 % 1 1 31536
90 % 1 1 30250
70 % 976 2342 2
50 % 2022 4843 1
40 % 2022 4843 1
30 % 2283 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures