Sequence Similarity Clusters for the Entities in PDB 1NIW

Entity #1 | Chains: A,C,E,G
calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 130 101
95 % 57 165 102
90 % 69 178 82
70 % 70 180 98
50 % 81 213 112
40 % 92 336 36
30 % 97 363 47
Entity #2 | Chains: B,D,F,H
Nitric-oxide synthase, endothelial protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15976
95 % 1 2 14981
90 % 1 2 14696
70 % 1 2 13788
50 % 1 2 12254
40 % 1 2 11116
30 % 1 2 9654

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.