Sequence Similarity Clusters for the Entities in PDB 1NIW

Entity #1 | Chains: A,C,E,G
calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 125 97
95 % 56 159 101
90 % 68 172 79
70 % 69 174 95
50 % 80 207 107
40 % 91 327 31
30 % 96 354 43
Entity #2 | Chains: B,D,F,H
Nitric-oxide synthase, endothelial protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14928
95 % 1 2 14008
90 % 1 2 13752
70 % 1 2 12910
50 % 1 2 11550
40 % 1 2 10483
30 % 1 2 9107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.