Sequence Similarity Clusters for the Entities in PDB 1NIV

Entity #1 | Chains: A,C
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 11140
95 % 3 3 10772 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 10624
70 % 5 5 6924
50 % 20 20 1395
40 % 36 37 628
30 % 37 38 610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures