Sequence Similarity Clusters for the Entities in PDB 1NIV

Entity #1 | Chains: A,C
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10690
95 % 3 3 10711 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 3 3 10573
70 % 5 5 7061
50 % 20 20 1310
40 % 34 34 673
30 % 37 38 573

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.