Sequence Similarity Clusters for the Entities in PDB 1NIU

Entity #1 | Chains: A,B
Alanine Racemase protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4709
95 % 9 12 2225 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 9 12 2285
70 % 9 12 2282
50 % 13 18 1406
40 % 18 28 1007
30 % 33 57 385

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.