Sequence Similarity Clusters for the Entities in PDB 1NIJ

Entity #1 | Chains: A
Hypothetical protein yjiA protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25730
95 % 2 3 13719 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 3 13494
70 % 2 3 12683
50 % 2 3 11292
40 % 2 3 10241
30 % 2 3 8909

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.