Sequence Similarity Clusters for the Entities in PDB 1NIJ

Entity #1 | Chains: A
Hypothetical protein yjiA protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27352
95 % 2 3 14555 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 3 14322
70 % 2 3 13462
50 % 2 3 11966
40 % 2 3 10838
30 % 2 3 9441

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures