Sequence Similarity Clusters for the Entities in PDB 1NIJ

Entity #1 | Chains: A
Hypothetical protein yjiA protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26507
95 % 2 3 14121 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 3 13895
70 % 2 3 13080
50 % 2 3 11629
40 % 2 3 10546
30 % 2 3 9186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures