Sequence Similarity Clusters for the Entities in PDB 1NIH

Entity #1 | Chains: A,C
HEMOGLOBIN (NICKELOUS DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 166 202 29
95 % 195 233 30
90 % 196 234 31
70 % 246 314 16
50 % 579 712 4
40 % 584 717 8
30 % 1002 1153 7
Entity #2 | Chains: B,D
HEMOGLOBIN (FERROUS CARBONMONOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 127 154 50
95 % 201 233 29
90 % 205 238 29
70 % 264 328 11
50 % 580 712 4
40 % 585 717 8
30 % 1003 1153 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.