Sequence Similarity Clusters for the Entities in PDB 1NID

Entity #1 | Chains: A
NITRITE REDUCTASE protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 1025
95 % 22 26 1356 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 22 26 1383
70 % 98 113 157
50 % 105 121 181
40 % 105 121 198
30 % 126 144 181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.