Sequence Similarity Clusters for the Entities in PDB 1NID

Entity #1 | Chains: A
NITRITE REDUCTASE protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 1075
95 % 22 26 1415 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 22 26 1443
70 % 100 115 164
50 % 107 123 189
40 % 107 123 203
30 % 128 146 185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures