Sequence Similarity Clusters for the Entities in PDB 1NID

Entity #1 | Chains: A
NITRITE REDUCTASE protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 1060
95 % 22 26 1392 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 22 26 1419
70 % 100 115 162
50 % 107 123 187
40 % 107 123 201
30 % 128 146 184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures