Sequence Similarity Clusters for the Entities in PDB 1NHK

Entity #1 | Chains: L,R
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13159
95 % 1 3 12534 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 12330
70 % 4 16 624
50 % 26 123 65
40 % 32 151 32
30 % 32 152 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.