Sequence Similarity Clusters for the Entities in PDB 1NHK

Entity #1 | Chains: L,R
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13586
95 % 1 3 12949 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 12732
70 % 4 19 443
50 % 27 127 57
40 % 33 155 33
30 % 33 156 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.