Sequence Similarity Clusters for the Entities in PDB 1NHE

Entity #1 | Chains: A,C
ALPHA-LACTALBUMIN protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 1977
95 % 12 12 2549
90 % 12 12 2600
70 % 12 12 2587
50 % 26 28 913
40 % 892 979 11
30 % 892 979 19
Entity #2 | Chains: B,D
BETA-1,4-GALACTOSYLTRANSFERASE protein, length: 286 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 3234
95 % 18 20 1340
90 % 34 37 561
70 % 34 37 599
50 % 34 37 642
40 % 38 41 639
30 % 38 41 632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.