Sequence Similarity Clusters for the Entities in PDB 1NHC

Entity #1 | Chains: A,B,C,D,E,F
Polygalacturonase I protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12280
95 % 1 1 11983 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 11822
70 % 1 1 11179
50 % 2 5 3463
40 % 5 9 2779
30 % 5 10 2503

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures