Sequence Similarity Clusters for the Entities in PDB 1NHC

Entity #1 | Chains: A,B,C,D,E,F
Polygalacturonase I protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12006
95 % 1 1 11739 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 11580
70 % 1 1 10953
50 % 2 5 3381
40 % 5 9 2712
30 % 5 10 2449

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.