Sequence Similarity Clusters for the Entities in PDB 1NGZ

Entity #1 | Chains: A
Germline Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 7924
95 % 1 6 7995 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 41 761 2
70 % 137 2516 1
50 % 284 5101 1
40 % 367 5750 1
30 % 445 7168 1
Entity #2 | Chains: B
Germline Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42694
95 % 1 6 7945
90 % 2 8 6765
70 % 138 2475 2
50 % 285 5101 1
40 % 368 5750 1
30 % 446 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures