Sequence Similarity Clusters for the Entities in PDB 1NGZ

Entity #1 | Chains: A
Germline Metal Chelatase Catalytic Antibody, Light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41204
95 % 1 6 7858 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 37 729 3
70 % 128 2362 1
50 % 265 4781 1
40 % 265 4781 1
30 % 283 5635 1
Entity #2 | Chains: B
Germline Metal Chelatase Catalytic Antibody, Heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40460
95 % 1 6 7837
90 % 1 6 7785
70 % 129 2311 2
50 % 266 4781 1
40 % 266 4781 1
30 % 284 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures